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CAZyme Gene Cluster: MGYG000002466_1|CGC4

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002466_00244
Pectate disaccharide-lyase
CAZyme 269469 271202 + PL2_2| PL2
MGYG000002466_00245
Lactose transport system permease protein LacF
TC 271243 272133 + 3.A.1.1.11
MGYG000002466_00246
L-arabinose transport system permease protein AraQ
TC 272126 273046 + 3.A.1.1.11
MGYG000002466_00247
Trehalose import ATP-binding protein SugC
TC 273060 274187 + 3.A.1.1.11
MGYG000002466_00248
Putative ABC transporter substrate-binding protein YesO
TC 274203 275495 + 3.A.1.1.11
MGYG000002466_00249
Oligogalacturonate-specific porin KdgM
TC 275807 276505 + 1.B.35.1.1
MGYG000002466_00250
Inner membrane protein YdjM
null 276842 277390 + YdjM
MGYG000002466_00251
L-cystine uptake protein TcyP
TC 277607 278998 + 2.A.23.1.8
MGYG000002466_00252
N-acetylmuramoyl-L-alanine amidase AmiD
null 279275 280126 - Amidase_2| PG_binding_1
MGYG000002466_00253
Pectin degradation repressor protein KdgR
TF 280396 281187 - TrmB
MGYG000002466_00254
Oligogalacturonate lyase
CAZyme 281374 282540 - PL22_1| PL22
MGYG000002466_00255
Riboflavin transporter RibZ
TC 282844 284211 + 2.A.1.3.17
MGYG000002466_00256
hypothetical protein
null 284383 285009 - No domain
MGYG000002466_00257
Protease HtpX
TC 285452 286333 - 9.B.1.1.6
MGYG000002466_00258
Tail-specific protease
TC 286657 288723 - 9.B.174.1.2
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is pectin

Protein ID eCAMI subfam CAZyme substrate
MGYG000002466_00244 PL2_e0|4.2.2.9 pectin
MGYG000002466_00254 PL22_e0|4.2.2.6 pectin

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location